Building a Machine Learning Taxon Classifier for Malaria Mosquitoes
Contributor: Deepak Silaych
Project with MalariaGEN focuses on building a machine-learning tool to classify species of Anopheles mosquitoes (the main carriers of malaria) using...
Science and medicine
Wellcome Sanger Tree of Life
Genome analysis for all species
Technologies
Cloud StorageJavaScriptmachine learningnextflowNLPPythonRust
Topics
bioinformaticsdatagenome analysisgenome assemblygenomicsmachine learning
- Total projects
- 8
- Years participating
- 3
- Most recent
- 2025
Participation history
Historical projects
Implementing a user interface to KinFin for interactive exploration of protein clustering data.
Contributor: Dinesh A
KinFin is a powerful tool for protein clustering analysis, but its current command-line interface limits accessibility and ease of use. This project...
Cloud-Native Tools for Detecting Novel Insecticide Resistance in Malaria Mosquitoes
Contributor: MOHAMED LAAREJ
This project develops cloud-native tools to detect novel insecticide resistance in African malaria mosquitoes. Current PLINK-based methods are...
Nextflow Pipelines for Variant Analyses
Contributor: Yunjia Zhang
This project developed scalable Nextflow pipelines for variant analyses across diverse eukaryotic genomes. The workflows support calling germline and...
Integrating KinFin Proteome Cluster analyses into Genome Browsing environments
Contributor: Rohan R. Barsagade
The project aims to integrate KinFin, a tool for analysing protein family clusters, into genome browsing environments like Ensembl and GenomeHubs....
Natural language search across the tree of life (GoaT NLP)
Contributor: Deep Nayak
The Tree of Life project at the Wellcome Sanger Institute contributes to the Earth BioGenome Project (EBP), aiming to sequence genomes of all Earth's...
Pathogen focused multiple mapping Nextflow pipeline
Contributor: Patel Darshil
This proposal aims to address the dated codebase of the existing multiple_mappings_to_bam.py pipeline in pathogen genomics by developing a new...
Conversion of the BlobToolKit pipeline to Nextflow
Contributor: Alexander Ramos
The BlobToolKit, implemented with Snakemake, is a pipeline designed to obtain quality metrics for eukaryotic genome assemblies. BlobToolKit is also...