Accelerated Read/Write and Robust OpenMS Workflows (ARROW)
Contributor: Avni Badiwale
This is a biparted project in which we first focus on integrating Apache Arrow into OpenMS’s build system and dependency management framework, as...
Science and medicine
OpenMS
OpenMS GSoC: Advancing Algorithms & AI for Biomedical Insights
Technologies
C++cythonPythonpytorchR
Topics
algorithmsautomationdeep learningweb
- Total projects
- 2
- Years participating
- 1
- Most recent
- 2025
Participation history
Historical projects
Optimizing Casanovo for Fast and Accurate De Novo Peptide Sequencing
Contributor: lingwen xu
I'm tackling Casanovo's slow beam search decoding, which stalls big proteomics datasets. By reducing GPU-CPU transfers and removing redundant steps,...