Intermine Cloud: Making Intermine cloud native and easing deployments
Contributor: Ankur Kumar
Intermine is a powerful data warehousing, integration and analysis tool used to store and share genomics data. However, setting up an instance of...
Science and medicine
InterMine
Integrating biological data sources, making it easy to query and analyse data
Technologies
clojureJavaJavaScriptPostgreSQLPythonR
Topics
bioinformaticsbiologydatagenomicsopen scienceweb
- Total projects
- 12
- Years participating
- 2
- Most recent
- 2019
Participation history
Historical projects
Upgrade dependencies of imjs and im-tables, update Docs, add helper methods and improve build chain of these libraries
Contributor: Laksh Singla
imjs and im-tables, written in CoffeeScript are client-side libraries for querying mine instances and displaying data in tabular format respectively,...
InterMine Schema Validator
Contributor: deepak
As Intermine is providing integrations with different biological data sources, Intermine has to work with different file formats to read data for the...
InterMine single sign-in
Contributor: Rahul-07
In the current scenario, A user logs in the desired intermine and saves the results and the required data. The problem arises when the same user...
Migrate RESTful web services from Struts to Spring
Contributor: Prabodh Kotasthane
Presently InterMine uses Struts framework which is outdated. InterMine provides RESTful web-services which facilitates to execute custom or templated...
Javascript Data Visualisations
Contributor: Akshat Bhargava
The current Intermine’s viewer interface works on JavaServer Pages Technology and is planned to be discontinued in a few years. And, a new interface...
Python Client Expansion
Contributor: Nupur Gunwant
Python Client is a software intended to make use of the data warehouses of InterMine in a more efficient manner. It is composed of a number of client...
InterMine Data Browser Tool
Contributor: Adrián Rodríguez Bazaga
The existing query builder in InterMine requires some experience to obtain statistical data about the different mine categories, which can become...
Intermine Solr deep bio data search
Contributor: Arunan Sugunakumar
Currently Intermine uses an old approach to handle bio data search. This project aims to improve the search feature using modern search engines like...
Cross-Intermine Search Tool
Contributor: Aman Dwivedi
Currently, we have around 30+ mines (and still growing) all around the globe. All mines have their own separate APIs and their own separate portals....
“Buzzbang Google-like bio data search”
Contributor: innovationchef
The project is about building a search engine for life sciences data based on Bioschemas.org . The data is scraped from all the relevant websites and...
Natural Language Queries for InterMine Databases
Contributor: Jacob Macneal
I hope to spend this summer providing much-needed additional functionality to InterMine, a software project which helps researchers create and manage...