Quality Triage via Image Visualization and Annotation
Contributor: Qianqian Zhou
Develop a web application within caMicroscope to enable users to visually triage multiple slides, adding annotations such as quality scores or...
Science and medicine
caMicroscope
Toolkit for cancer imaging research
Technologies
JavaScriptmedical imagingMongoDBNode.jsopencvPythontensorflow
Topics
artificial intelligencedatadicom pathologydistributed systemsimage analysismachine learningmicroscopyscience and medicine
- Total projects
- 13
- Years participating
- 4
- Most recent
- 2024
Participation history
Historical projects
Pathologist Annotation Behavior Report
Contributor: Yuka Usui
Many pathologists use caMicroscope to annotate WSI cases in their daily work. How pathologists annotate the slide and the different behaviors that...
Image Classification using Foundation Models
Contributor: Shakib Khan
The aim of this project is to focus on patch-level classification tasks within the domain of whole slide tissue images. The approach involves...
DICOM & BioFormats
Contributor: cgdogan
My project goal was to add DICOM file support to caMicroscope, a Whole Slide Image viewer. The viewer backend (OpenSlide) didn't support DICOM, so we...
Machine Learning Training Assistant
Contributor: Dung Do Tien
To improve pathology data collection, caMicroscope has added specific tools for assisting with annotations and classifications. However, these tools...
Multi-channel Imaging Support
Contributor: Tarun Jain
This project aims to add support for Multi-Channel Imaging in caMicroscope, a platform used for visualizing and analyzing medical imaging data....
Real Time Collaborative Pathology
Contributor: Vedant Nandoskar
This project aims to develop a feature for Real Time Collaboration on the caMicroscope Slide Viewer which would give users the ability to work...
Cross-Slide Coordinated Viewing
Contributor: Hemansh Khaneja
Often, it's useful for users to compare different results on an image. To facilitate this, caMicrocope supports viewing the same image with different...
RBAC Authorization with Cache Implementation using higher order functions
Contributor: Yash Kumar Verma
Currently, caMicroscope uses attribute-based access control, which does not clearly represent the notion of authorization in users and faces...
Smart Pens
Contributor: Rohan Mallick
This project would involve adapting pathology annotation tools to prefer following edges in the base image when close and also add other smart...
Integrate an optical microscope with a camera and motorized stage - Collaboration with FDA
Contributor: Peddi Sai Varshith
eeDAP is an evaluation environment for Digital and Analog Pathology. The software has two modes one for digital WSI image evaluation and other for...
Pathology Algorithm Development Workbench
Contributor: Akhil Rana
caMicroscope is a tool to view, annotate, and analyse biomedical images. The goal of this project is to make an algorithm development workbench where...
Cancer Region of Interest Extraction and Extending Features
Contributor: Archit Roychoudhury
At present caMicroscope has many features like marking up images, running machine learning models on individual images, getting the predictions and...